ABOUT THIS RECORDspecies: Phaseolus acutifolius
miRNA family: MIR1097
source: miRNEST
Taxonomy by NCBI:
Phaseolus acutifolius Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAGCCATTGTTGTTGGTGGGG miRNA* TCACAACGCAGAGAAGGTTAGG mismatches: 5 bulges: 1 |
pre-miRNA
GAACAGGTGAAGGAGTTGACGAAGGAAGCAGAAGCCATTGTTGTTGGTGGGGGAAACCTCACAACGCAGAGAAGGTTAGGAATTAGAGAACGACGACGTT
TGATGAGT
dot-bracket secondary structure
..............(((.........)))...((((.((.((((..((((((....))))))...)))).)).)))).....(((..(((((....))))
)..)))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
GAACAGGTGAAGGAGTTGACGAAGGAAGCAGAAGCCATTGTTGTTGGTGGGGGAAACCTCACAACGCAGAGAAGGTTAGGAATTAGAGAACGACGACGTT
TGATGAGT
dot-bracket secondary structure
..............(((.........)))...((((.((.((((..((((((....))))))...)))).)).)))).....(((..(((((....))))
)..)))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
