ABOUT THIS RECORDspecies: Phaseolus acutifolius
miRNA family: MIR2910
source: miRNEST
Taxonomy by NCBI:
Phaseolus acutifolius Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGTTGGTGGAGCGATTTGTC miRNA* CGAGACCTCAGCCCTGCTAAG mismatches: 4 bulges: 2 |
pre-miRNA
TGGTGGTGCATGGCCGTTTCTTAGTTGGTGGAGCGATTTGTCTGGTTTAATTCCGTTAAACGACGAGACCTCAGCCCTGCTAAGAAGCTGGCCGTGGAGG
GT
dot-bracket secondary structure
........(((((((((((((((((.(((.(((...((((((..(((((((...)))))))))))))..))).)))..)))))))))).)))))))....
..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGGTGGTGCATGGCCGTTTCTTAGTTGGTGGAGCGATTTGTCTGGTTTAATTCCGTTAAACGACGAGACCTCAGCCCTGCTAAGAAGCTGGCCGTGGAGG
GT
dot-bracket secondary structure
........(((((((((((((((((.(((.(((...((((((..(((((((...)))))))))))))..))).)))..)))))))))).)))))))....
..
SIMILARITIES| miRBase no hits PMRD peu-miR2910: 0.0000000000003 microPC no hits | UniProt no hits RFAM SSU_rRNA_eukarya: 7e-24 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
