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ABOUT THIS RECORD
ID:
MNEST001936
species:
Picea glauca
miRNA family:
miR950-5p
source:
miRNEST
Taxonomy by NCBI:
Picea glauca
Picea
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAACATCTGGGCCACGATGGT
miRNA*
CATGGTGCCCCAGATGATAAG
mismatches:
3
bulges:
0
View larger
pre-miRNA
GGTGTAGGGAAAGAGGTTTGGAAGGTGATCT
TAACATCTGGGCCACGATGGT
TTATTGTTCATCGTGTATTTATCATAAAC
CATGGTGCCCCAGATGATA
AG
AGCACCTTCGCCTTCGTGCCTTGTTCCA
dot-bracket secondary structure
.......((((.(((((.(((((((((.(((
((.((((((((.(((.(((((
((((.((.((...)).....)).))))))
))).))).)))))))).))
))
).))))))).....)).))))).)))).
SIMILARITIES
miRBase
pab-MIR950
:
2e-39
PMRD
pta-miR950b
:
0.0000000004
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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