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ABOUT THIS RECORD
ID:
MNEST001941
species:
Picea glauca
miRNA family:
MIR418
source:
miRNEST
Taxonomy by NCBI:
Picea glauca
Picea
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GAATGGGATGATGAACTGACA
miRNA*
TAATAATATCATCCTCATTCGT
mismatches:
5
bulges:
1
View larger
pre-miRNA
ATCTCAATCCA
GAATGGGATGATGAACTGACA
GTTGGTGTTCCATCCCCTACTGCACAACTCAAAGTGGTGAATTCGAAATTGCATTGGATTGGATGGAC
AATTTAGAGGATATTTGAAACATTTTAGTTTCCTAGTTTATTTGATTTTGGGAATATCTTCCCAGATTATGTAAACAGTTTGATATTATCCACAGGGAGG
TTTTACCCTGTGGAAAGACTTATAAATACCTATTATTTTG
TAATAATATCATCCTCATTCGT
GGGAGAAC
dot-bracket secondary structure
.(((((.....
(((((((((((((.....(((
(..(((..(((((((.(((.((((.((.(((......))).))......)))).)))...))))))).
.(((((.((((...(((((....)))))..)))).((((((.((((((.(((((....))))))))))).)))))).((((.......(((((((((...
.....))))))))).))))...)))))))).......)))
).....)))))))).))))).)
))))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record