ABOUT THIS RECORDspecies: Pseudoroegneria spicata
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACTACTCCCTCCGTCCCAAA miRNA* TAGGACGGAGGGAGTATATA mismatches: 1 bulges: 1 |
pre-miRNA
TAGATATATACTACTCCCTCCGTCCCAAAATAAGTGTCTCAAGTTTAAACTTGAGACGAGACACTTATTTTAGGACGGAGGGAGTATATAGTAGA
dot-bracket secondary structure
......((((.((((((((((((((.((((((((((((((..((((.......)))))))))))))))))).)))))))))))))))))).....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TAGATATATACTACTCCCTCCGTCCCAAAATAAGTGTCTCAAGTTTAAACTTGAGACGAGACACTTATTTTAGGACGGAGGGAGTATATAGTAGA
dot-bracket secondary structure
......((((.((((((((((((((.((((((((((((((..((((.......)))))))))))))))))).)))))))))))))))))).....
SIMILARITIES| miRBase far-MIR1122: 0.0000003 PMRD hpr-miR1120: 0.000000000000001 microPC miR1439: 0.000000005 | UniProt no hits RFAM MIR1122: 0.0000000003 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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