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ABOUT THIS RECORD

ID: MNEST002366
species: Raphanus raphanistrum subsp. landra
miRNA family: MIR824
source: miRNEST

Taxonomy by NCBI:
Raphanus raphanistrum subsp. landra Raphanus raphanistrum Raphanus Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGACCATTTGTGAGAAGGGG

miRNA*
 CCTTCTCATCGATGGTCTAGA

mismatches: 1
bulges: 0
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pre-miRNA
 TGACAGGTTCGCTCGAGTTGTCTCTCATGTCTAGACCATTTGTGAGAAGGGGTTTTATAGGTGCACCTCACCAATCTCTAAATGACTAAATATACGATTA
GTATTAGGCTCATATAAGGAAGTTAACTTCTATACATAAAGTGCACTGATGACTTTTCCAGATGCTATATAGATACTTTTTAGAATTAGGTCATGCCAAG
TCTCCAACTCATATATAATCGTATACACTTTTGGACATACATTTTCTCTAAGAGATGCCAAACTTCTGTCTGGAGTGGAGCTTTCTCGTGATAGCTCATA
ATTTGTAGCTTGCACAACTTAAGCTACACTAGTTTACTTGATAAAAAAATTGAGTGGAGTGGGGGGGAGGTGCTGGATTATTTCCCCTTCTCATCGATGG
TCTAGATTTGCGAGGTGACTCTAATAGTGGTAAA

dot-bracket secondary structure
........(((((.((((((((((.((.((((((((((((.(((((((((((....((((..(((((((.((..(((.((.((((((.(((((.......
))))).)).)))).)).)))(((..((((.........))))..))).((((((((((.(((...(((....)))...))).)))..))))))).((...
.(((((.((((......((((..((.(((((((((((.......((((...))))...........))))))))((.(((((.((....)).)))))...
)).(((((((((.......)))))))))..))).))..))))........)))))))))..)).)))))))))....))))..))))))))))).)))))
))))))).)).))))))))))....)))))....


SIMILARITIES
miRBase bra-MIR824: 0.0000000000001

PMRD bra-miR824: 0.0000000000001

microPC no hits		UniProt no hits

RFAM MIR824: 0.000000000002		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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