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ABOUT THIS RECORD

ID: MNEST002437
species: Raphanus sativus var. oleiformis
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Raphanus sativus var. oleiformis Raphanus sativus Raphanus Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGAGAGCACA

miRNA*
 TAGCTCTCTGGTTTAGTGTCCAT

mismatches: 4
bulges: 2
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pre-miRNA
 GTGGTGTGGGTTTGACAGAAGAGAGAGAGCACAGTTTGAGTCGCTGCCAATCCCCTTGTAGCTCTCTGGTTTAGTGTCCATAACCTCTG

dot-bracket secondary structure
)......(((((.((((.(((..(((((((((((.(((.((....))))).....)))).)))))))..)))..))))...)))))...


SIMILARITIES
miRBase far-MIR529: 4.0E-9

PMRD ath-miR156q: 3.0E-16

microPC miR157: 2.0E-5		UniProt sp|Q700W2|SPL9_ARATH: 2.0E-6

RFAM 6mir-156: 0.0003		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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