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ABOUT THIS RECORD

ID: MNEST002538
species: Saccharum officinarum
miRNA family: MIR437
source: miRNEST

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAAGTTAGAGAAGTTTGACTT

miRNA*
 GTCAAACCTCTCTAACTTTGA

mismatches: 1
bulges: 0
View larger
pre-miRNA
 CTACTCTCTGTTCCAAGTTATAGTTTACTACTAAACTTCAGCTTTGTCCCAAGTCAAACCTCTCTAACTTTGATCAAGTTTATAGAAAAATGCACCAAAA
TCTAGAATATCAAACTAGTTCCATTAAATTCTCCATGAAATATATTTTGATAATGCATTTATTGAACTTGTAGATGATAATATATTTTTTCTAAAAACTT
GATCAAAGTTAGAGAAGTTTGACTTANGACAAAGCTAAAGTGAACAATAGTTTGAAACGGCGGGAGTACCTTTT

dot-bracket secondary structure
.(((((((((((.((((((((.((((........((((.(((((((((..(((((((((.(((((((((((((((((((((.((((((((.........(
((((.(((((((((.((.(((...............)))...)).)))))))...............)).)))))..........)))))))).))))))
))))))))))))))).)))))))))..))))))))).)))))))).)))))))).)))))..))))))......


SIMILARITIES
miRBase ssp-MIR437a: 3e-96

PMRD sof-miR437: 1e-45

microPC miR437: 3e-96		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: ssp-MIR437a from miRBase (MNEST042475)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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