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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST002538
species: Saccharum officinarum
miRNA family: MIR437
source: miRNEST

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAAGTTAGAGAAGTTTGACTT

miRNA*
 GTCAAACCTCTCTAACTTTGA

mismatches: 1
bulges: 0
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pre-miRNA
 CTACTCTCTGTTCCAAGTTATAGTTTACTACTAAACTTCAGCTTTGTCCCAAGTCAAACCTCTCTAACTTTGATCAAGTTTATAGAAAAATGCACCAAAA
TCTAGAATATCAAACTAGTTCCATTAAATTCTCCATGAAATATATTTTGATAATGCATTTATTGAACTTGTAGATGATAATATATTTTTTCTAAAAACTT
GATCAAAGTTAGAGAAGTTTGACTTANGACAAAGCTAAAGTGAACAATAGTTTGAAACGGCGGGAGTACCTTTT

dot-bracket secondary structure
.(((((((((((.((((((((.((((........((((.(((((((((..(((((((((.(((((((((((((((((((((.((((((((.........(
((((.(((((((((.((.(((...............)))...)).)))))))...............)).)))))..........)))))))).))))))
))))))))))))))).)))))))))..))))))))).)))))))).)))))))).)))))..))))))......


SIMILARITIES
miRBase ssp-MIR437a: 3e-96

PMRD sof-miR437: 1e-45

microPC miR437: 3e-96		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: ssp-MIR437a from miRBase (MNEST042475)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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