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ABOUT THIS RECORD

ID: MNEST002661
species: Solanum melongena
miRNA family: MIRf968
source: miRNEST

Taxonomy by NCBI:
Solanum melongena Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTGTAAAGCTCAGGAGGGATA

miRNA*
 TCCATCCTGAGTTTCACTGCT

mismatches: 4
bulges: 0
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pre-miRNA
 GGTGCTGTCCTTTCTTTCTGTTTTTTCCCTTTCATAAACTATAGTGAAATATTTTAATTTCTGGTGGAAATGCATGGAGAATCTGTAAAGCTCAGGAGGGA
TAGCGCCATGGATGGCTCTCTTTCATCTTCTTACGCATCTCTATAGCGCTATCCATCCTGAGTTTCACTGCTTTCTTATGCTCTCTTTAATGCATCACAT
TTTTTCCCTGTGTATGGTCTAGGTTTCGATGAAGTTGGATTTGCGCAAGG

dot-bracket secondary structure
)((((.((((.((((((.(((..(((((...(((.(((.((.((((...)))).)).))).))).))))).))).))))))...((.((((((((((.(((
((((((.(((((..((..................))...))))).))))))))).)))))))))).)).(((((.((..(((.......((((((.....
.........))))))......)))...)).))))).))))..))))....


SIMILARITIES
miRBase gma-MIR390a: 1.0E-14

PMRD ghr-miR390c: 4.0E-12

microPC miR390: 1.0E-8		UniProt no hits

RFAM 0MIR390: 3.0E-13		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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