ABOUT THIS RECORDspecies: Taraxacum kok-saghyz
miRNA family: MIRf731
source: miRNEST
Taxonomy by NCBI:
Taraxacum kok-saghyz Taraxacum Crepidinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGGCTCGGGCTCGGCTCGTTT miRNA* ACGAATCGATCCCGAGTAGCT mismatches: 5 bulges: 0 |
pre-miRNA
CTCACCAACATAGGCTCGGGCTCGGCTCGTTTAATAAACGAGCTTTTAAATGGTACTCGGGCTCGGCTCGGGCTCGTTTAACTCGAACTCGAATCGAGCG
TTTAACGAATCGATCCCGAGTAGCTCACGAGTA
dot-bracket secondary structure
.............(((((((.((((.(((((.(((...((((..((.....))..)))).((((((.(((((.(((.......))).))))).)))))))
)).))))).)))).))))))).(((....))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CTCACCAACATAGGCTCGGGCTCGGCTCGTTTAATAAACGAGCTTTTAAATGGTACTCGGGCTCGGCTCGGGCTCGTTTAACTCGAACTCGAATCGAGCG
TTTAACGAATCGATCCCGAGTAGCTCACGAGTA
dot-bracket secondary structure
.............(((((((.((((.(((((.(((...((((..((.....))..)))).((((((.(((((.(((.......))).))))).)))))))
)).))))).)))).))))))).(((....))).
SIMILARITIES| miRBase no hits PMRD osa-miRf10970-akr: 0.0001 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
