miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST002686
species: Taraxacum kok-saghyz
miRNA family: MIRf731
source: miRNEST

Taxonomy by NCBI:
Taraxacum kok-saghyz Taraxacum Crepidinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGGCTCGGGCTCGGCTCGTTT

miRNA*
ACGAATCGATCCCGAGTAGCT

mismatches: 5
bulges: 0

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pre-miRNA
CTCACCAACATAGGCTCGGGCTCGGCTCGTTTAATAAACGAGCTTTTAAATGGTACTCGGGCTCGGCTCGGGCTCGTTTAACTCGAACTCGAATCGAGCG
TTTAACGAATCGATCCCGAGTAGCTCACGAGTA


dot-bracket secondary structure
.............(((((((.((((.(((((.(((...((((..((.....))..)))).((((((.(((((.(((.......))).))))).)))))))
)).))))).)))).))))))).(((....))).



SIMILARITIES
miRBase no hits

PMRD osa-miRf10970-akr: 0.0001

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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