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ABOUT THIS RECORD
ID:
MNEST002686
species:
Taraxacum kok-saghyz
miRNA family:
MIRf731
source:
miRNEST
Taxonomy by NCBI:
Taraxacum kok-saghyz
Taraxacum
Crepidinae
Cichorieae
Cichorioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGGCTCGGGCTCGGCTCGTTT
miRNA*
ACGAATCGATCCCGAGTAGCT
mismatches:
5
bulges:
0
View larger
pre-miRNA
CTCACCAACAT
AGGCTCGGGCTCGGCTCGTTT
AATAAACGAGCTTTTAAATGGTACTCGGGCTCGGCTCGGGCTCGTTTAACTCGAACTCGAATCGAGCG
TTTA
ACGAATCGATCCCGAGTAGCT
CACGAGTA
dot-bracket secondary structure
...........
..(((((((.((((.(((((.
(((...((((..((.....))..)))).((((((.(((((.(((.......))).))))).)))))))
)).)
)))).)))).))))))).(((
....))).
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf10970-akr
:
0.0001
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record