ABOUT THIS RECORDspecies: Taraxacum kok-saghyz
miRNA family: MIRf493
source: miRNEST
Taxonomy by NCBI:
Taraxacum kok-saghyz Taraxacum Crepidinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCGGACCAAGCTTCATTCTT miRNA* GAATGAAGTTTGTTCCAAGAT mismatches: 3 bulges: 0 |
pre-miRNA
TGAGGTTGTTTGGAATGAAGTTTGTTCCAAGATCCCTTTTTTGGTTTTTGAGGGATCTCGGACCAAGCTTCATTCTTGACAGTCGT
dot-bracket secondary structure
...(((((((.(((((((((((((.(((.(((((((((...........))))))))).))).))))))))))))).)))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGAGGTTGTTTGGAATGAAGTTTGTTCCAAGATCCCTTTTTTGGTTTTTGAGGGATCTCGGACCAAGCTTCATTCTTGACAGTCGT
dot-bracket secondary structure
...(((((((.(((((((((((((.(((.(((((((((...........))))))))).))).))))))))))))).)))))))..
SIMILARITIES| miRBase ptc-MIR166o: 0.0000003 PMRD ptc-miR166o: 0.0000003 microPC miR166: 0.0002 | UniProt no hits RFAM mir-166: 0.000005 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
