miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Panax ginseng, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST002687
species: Taraxacum kok-saghyz
miRNA family: MIRf493
source: miRNEST

Taxonomy by NCBI:
Taraxacum kok-saghyz Taraxacum Crepidinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTCGGACCAAGCTTCATTCTT

miRNA*
 GAATGAAGTTTGTTCCAAGAT

mismatches: 3
bulges: 0
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pre-miRNA
 TGAGGTTGTTTGGAATGAAGTTTGTTCCAAGATCCCTTTTTTGGTTTTTGAGGGATCTCGGACCAAGCTTCATTCTTGACAGTCGT

dot-bracket secondary structure
...(((((((.(((((((((((((.(((.(((((((((...........))))))))).))).))))))))))))).)))))))..


SIMILARITIES
miRBase ptc-MIR166o: 0.0000003

PMRD ptc-miR166o: 0.0000003

microPC miR166: 0.0002		UniProt no hits

RFAM mir-166: 0.000005		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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