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ABOUT THIS RECORD
ID:
MNEST002688
species:
Taraxacum kok-saghyz
miRNA family:
miR166g
source:
miRNEST
Taxonomy by NCBI:
Taraxacum kok-saghyz
Taraxacum
Crepidinae
Cichorieae
Cichorioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGAATGTTGTTTGGCTCGAGG
miRNA*
TCGGACCAGGCTTCATTCCCC
mismatches:
4
bulges:
0
View larger
pre-miRNA
TTTCTTTTGCGG
GGAATGTTGTTTGGCTCGAGG
TCACTAGAGAGCTTAGATCTCTCTCTCTATCTCTATCTCTATATACATCTATACATATAGATACAGA
TATATGTATCTATCTATGATGTTATAATTATGCTCAATTGGTCAACGGATCCAACATCCATGGTCTTTGTTGATTAATGAGCTTTAGATGAATCTTGATC
GCTGGATCTGGTGTAC
TCGGACCAGGCTTCATTCCCC
CCAATTGTT
dot-bracket secondary structure
......(((.((
((((((..((((((.(((((.
.(((((((...((..((((........(((((.((....((((.(((((.(((...(((((((((..
....))))))))).))))))))))))..)).(((((.((((((((((((.(((.......)))..)))))))))))))))))...)))))......))))
...)).)))))))..)
)))).))))))..))))))))
.))).....
SIMILARITIES
miRBase
ptc-MIR166a
:
0.0000000002
PMRD
ptc-miR166a
:
0.0000000002
microPC
miR166
:
0.0000008
UniProt
no hits
RFAM
mir-166: 0.000001
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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