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ABOUT THIS RECORD
ID:
MNEST002692
species:
Taraxacum kok-saghyz
miRNA family:
MIR393
source:
miRNEST
Taxonomy by NCBI:
Taraxacum kok-saghyz
Taraxacum
Crepidinae
Cichorieae
Cichorioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCAAAGGGATCGCATTGATC
miRNA*
TCATGTGATGTCTTTGGAAG
mismatches:
1
bulges:
1
View larger
pre-miRNA
CACTAGATTTGATTATGTTGCAGCAGGCGGAAGCT
TCCAAAGGGATCGCATTGATC
CGGTTTATTAGATGATGTGATTCATTCGTATTTGTTTCAGGATT
ATCCATCCATGGAAGCAACTCGATCTGAGATGATAATTAATAATTTGGA
TCATGTGATGTCTTTGGAAG
TTTCCGTCAGTGTTTGCATTGATCTATCCAT
C
dot-bracket secondary structure
.....(((..(((((...((((((.((((((((((
((((((((.(((((((.((((
(((.(((((((.((...((.((((.(((...(((((((.((((.
....))))...)))))))..)))..)))).)).)).))))))).)))))
))))))))).))))))))))
)))))))).))...)))).))))).)))...
.
SIMILARITIES
miRBase
sbi-MIR393
:
0.0000002
PMRD
sbi-miR393
:
0.0000002
microPC
miR393
:
0.000000003
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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