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ABOUT THIS RECORD
ID:
MNEST002722
species:
Theobroma cacao
miRNA family:
MIRf325
source:
miRNEST
Taxonomy by NCBI:
Theobroma cacao
Theobroma
Byttnerioideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GACCATTTTCGTTGCTCTCTT
miRNA*
GAAGCACTGGTATTGGCGT
mismatches:
4
bulges:
2
View larger
pre-miRNA
ATCGCCTTGAT
GACCATTTTCGTTGCTCTCTT
CCTCCCCGAAACAAAAGGAATTCCTCTCGACTCCATGAATTTAGTTTGGGA
GAAGCACTGGTATTGGC
GT
CGGTTTGT
dot-bracket secondary structure
...(((..(((
(.(((...(((.((((.((((
((..............(((.((......)).))).............))))
)))))).)))...))))
))
))))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q93Y91|STP5_ARATH: 0.00000000005
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record