ABOUT THIS RECORDspecies: Triticum monococcum
miRNA family: MIR1436
source: miRNEST
Taxonomy by NCBI:
Triticum monococcum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATATTATGGGACGGAGGGA miRNA* CCATCCGTCCCATAATATAA mismatches: 3 bulges: 1 |
pre-miRNA
GCCCCATCCGTCCCATAATATAAAAGTGTTTTTCACACTACACTAGTGACAAAAACGCTCTTATATTATGGGACGGAGGGA
dot-bracket secondary structure
..(((.(((((((((((((((((.(((((((((..(((((...)))))..))))))))).)))))))))))))))))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCCCCATCCGTCCCATAATATAAAAGTGTTTTTCACACTACACTAGTGACAAAAACGCTCTTATATTATGGGACGGAGGGA
dot-bracket secondary structure
..(((.(((((((((((((((((.(((((((((..(((((...)))))..))))))))).)))))))))))))))))))).
SIMILARITIES| miRBase hvu-MIR1120: 0.000000000001 PMRD tae-miR1120: 0.000000000004 microPC miR1439: 0.0000000000003 | UniProt no hits RFAM MIR1122: 5e-24 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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