ABOUT THIS RECORDspecies: Triticum turgidum subsp. durum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCCGTAAACTAATATAAGAG miRNA* CTTATATTAGTTTACAGAGGA mismatches: 1 bulges: 0 |
pre-miRNA
TTATCTACTCCCTCCGTAAACTAATATAAGAGTGTTTAGATTACTACTTTAGTGATCTAAACGTTCTTATATTAGTTTACAGAGGAAGTATACA
dot-bracket secondary structure
.....((((.((((.(((((((((((((((((((((((((((((((...))))))))))))))))))))))))))))))).)))).))))....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTATCTACTCCCTCCGTAAACTAATATAAGAGTGTTTAGATTACTACTTTAGTGATCTAAACGTTCTTATATTAGTTTACAGAGGAAGTATACA
dot-bracket secondary structure
.....((((.((((.(((((((((((((((((((((((((((((((...))))))))))))))))))))))))))))))).)))).))))....
SIMILARITIES| miRBase tae-MIR1121: 8e-17 PMRD tmo-miR1120: 2e-23 microPC miR1121: 0.000000005 | UniProt no hits RFAM MIR1122: 1e-34 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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