ABOUT THIS RECORDspecies: Triticum turgidum subsp. durum
miRNA family: MIR2033
source: miRNEST
Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATTTCTTTACAGATGGAGCA miRNA* CTCCCTCCGTAAAGAAATATA mismatches: 4 bulges: 0 |
pre-miRNA
AAAAAAGCACTCCCTCCGTAAAGAAATATAATAAAATAATGATCTAAACGTTTTTATATTTCTTTACAGATGGAGCAGATGAG
dot-bracket secondary structure
.........((((.((.((((((((((((((.((................)).)))))))))))))).)).))))........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAAAAAGCACTCCCTCCGTAAAGAAATATAATAAAATAATGATCTAAACGTTTTTATATTTCTTTACAGATGGAGCAGATGAG
dot-bracket secondary structure
.........((((.((.((((((((((((((.((................)).)))))))))))))).)).))))........
SIMILARITIES| miRBase tae-MIR1121: 0.000004 PMRD ave-miR1120: 0.0000002 microPC no hits | UniProt no hits RFAM MIR1122: 0.000004 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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