ABOUT THIS RECORDspecies: Triticum turgidum subsp. durum
miRNA family: MIR2033
source: miRNEST
Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATTTCTTTACAGATGGAGCA miRNA* CTCCCTCCGTAAAGAAATATA mismatches: 4 bulges: 0 |
pre-miRNA
GAAAAAAGCACTCCCTCCGTAAAGAAATATAATAAAATAATGATCTAAACGTTTTTATATTTCTTTACAGATGGAGCAGATGAG
dot-bracket secondary structure
).........((((.((.((((((((((((((.((................)).)))))))))))))).)).))))........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAAAAAAGCACTCCCTCCGTAAAGAAATATAATAAAATAATGATCTAAACGTTTTTATATTTCTTTACAGATGGAGCAGATGAG
dot-bracket secondary structure
).........((((.((.((((((((((((((.((................)).)))))))))))))).)).))))........
SIMILARITIES| miRBase tae-MIR1121: 4.0E-6 PMRD ave-miR1120: 2.0E-7 microPC no hits | UniProt no hits RFAM 2MIR1122: 4.0E-6 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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