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ABOUT THIS RECORD
ID:
MNEST002853
species:
Bruguiera gymnorhiza
miRNA family:
MIRf511
source:
miRNEST
Taxonomy by NCBI:
Bruguiera gymnorhiza
Bruguiera
Rhizophoraceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GAAGAATTGTAAAGAGGGGAT
miRNA*
TCCCTCTTCATTTTCTTCCC
mismatches:
4
bulges:
1
View larger
pre-miRNA
AAAATA
TCCCTCTTCATTTTCTTCCC
ATCCTCGTCCCACCTGGAATTCGGAATCCCATCAAACTCGAGATTCCACAAATCACTGACAGAACTCCATTCCC
TTGTGCCTGATTCGCATCGTTTTGATGCAATCATCATCGTCCGATCCACCTAATGTCCCCGGCTGATCGGGCGACTGGTCAAAATAAAAGAAAAGAAAGA
AAGCATTCTTACGGTCTGCCTTAACACGACGCG
GAAGAATTGTAAAGAGGGGAT
AAA
dot-bracket secondary structure
......
((((((((.((.(((((((.
.(((..((...))..)))....((((((...((......))))))))...(((((...((((............
))))...))))).((.((((.((((.(((...(((.((((((((((..((..........))..))))))))))((..((.........))..)).((((
(....)))))..))).))).)))).)))).)))
))))))..)).))))))))..
...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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