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ABOUT THIS RECORD
ID:
MNEST002924
species:
Centaurea maculosa
miRNA family:
MIR2673
source:
miRNEST
Taxonomy by NCBI:
Centaurea maculosa
Centaurea
Centaureinae
Cardueae
Carduoideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTTCTTCCTCTTCCTCTTCCT
miRNA*
AAGAGCAGGAGGAGTTGGAA
mismatches:
3
bulges:
1
View larger
pre-miRNA
CCAACAACACGAG
AAGAGCAGGAGGAGTTGGAA
GAAGGGTAACCACTCCAGTCGGTCGGAAAATGACGACGGCGACGTTGAACGCCGCGATGAACGGCGG
TTTGGCCGCAGTAGGTGCCGGCGGCGGTGGTGGTGGTGGTGGAGTCATCGGCCAAAAGACGGTGCTGATAACAGGGGTTAGCAGAGGTCTTGGGAGAGCC
CTAGCCCTAGAATTGGGGAAGAGAGGCCATTCTGTTATTGGCTGCTCTCGAACTCAACAAAAACTCGATTCTCTTCAATCGGAGCTCTCTTCTGAACCTT
CTT
CTTCTTCCTCTTCCTCTTCCT
CTGAAAAACA
dot-bracket secondary structure
..........(((
(((((.((((((((..((((
(((((.(((((((((((((((((((........))))..)))).(((..(((((((.((....((((
(...)))))..))..)).))))).)))))).))))))(((.((....)).)))..(((((..(((((((.......)))))))...)))))(((((((((
(...(((.......)))((((((((((((.........)))))....((((.............)))).)))))))....)).)))))))).))..))))
)))
))..)))))))).))))).))
).........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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