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ABOUT THIS RECORD

ID: MNEST002944
species: Centaurea maculosa
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATTTCTTCATCATCATCATCT

miRNA*
 TGATGATGATGATGATGAGACCA

mismatches: 2
bulges: 2
View larger
pre-miRNA
 TCTTCTTCTCCATTTCTTCATCATCATCATCTCTTCATCCCAAAACCATCTTATGACTTCTAAACGACAGCCTCAGGCATTGCCGAAATTCGGCGAATGG
GACGTAAAAAATCCGTCCTCTGCCGATGGATTCACGGTCATATTCGCAAAGGCACGGGATGACAAGAAAACCAACGAAACCGTCACCGTTCCACCTCAAA
AAAGCAACAGCACCAACAAACCCCCTCTTCCACCACAACACCAACAGCAGCAGAATCGGAAATACGAAGAGGAATCAAAGAACTCTAGGTTTTGTTGTTT
TTGATGATGATGATGATTTGAGGATCCATTGTCAACAAATTGATGAACATGTGTGGTTCTTGATCAGAACTTTAAAATGGATGGTGGCTGGTTTGATTTG
ATTGATGATGATGATGATGAGACCAAGGTTAGG

dot-bracket secondary structure
(((...(((...((((.((((((((((((((((.(((..(((..(((((((...((.((((...(((.((((.(((((((((((((...)))))))..((
((((.........)))))).))))..(((((((..((((((..(((....((.((((...(((..................))).)))).))...(((.(
((((((((((.(((.........(((((((..((.......................))......)))))))...............))).)))))))))
))..))))))..))))))...)))))))(((((((....)))))))...))...)))).)))...)))).))......)))))))...)))..)))...)
)..)))))))))))))).))))...)))..)))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|Q8GYN5|RIN4_ARATH: 0.00001

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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