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ABOUT THIS RECORD

ID: MNEST002954
species: Centaurea solstitialis
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCATA

miRNA*
TGCTCACTTCTCTTGCTGTCAGC

mismatches: 0
bulges: 2

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pre-miRNA
AGATAGAAAGCTGACAGAAGAGAGTGAGCATATGCAAAGCAATTGTATAGAAAAACTATACATTTGTTGGAATTATGCGTGTGCTCACTTCTCTTGCTGT
CAGC
TATACCCT


dot-bracket secondary structure
........((((((((((((((((((((((((((((.(((((.(((((((.....))))))).))))).......))))))))))))).)))))).))))
))))
).......



SIMILARITIES
miRBase zma-MIR156c: 0.0000003

PMRD zma-miR156c: 0.0000003

microPC miR156: 1e-46
UniProt no hits

RFAM mir-156: 0.0004
most similar mature miRNAs

Identical with: miR156 from microPC (MNEST045062)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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