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ABOUT THIS RECORD

ID: MNEST002959
species: Centaurea solstitialis
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCACTGCCTCTTCCCTGGCT

miRNA*
 ACAGGGACGAGACAGAGCCCG

mismatches: 5
bulges: 0
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pre-miRNA
 TTTTGCGTGATTTTAATGGTATAGATGGAGATGTGAGGGTAGACAGGGACGAGACAGAGCCCGAAAAAGCCTAGTCAATACTTGGGTCAGTATTGTTGTCT
TTTTCATGCACTGCCTCTTCCCTGGCTATCCTCTTCTCTCTATACTCGTGTTGTTTGATTATGTT

dot-bracket secondary structure
)...((((((((.((((((((((((..((((...((((((((.((((((.(((.(((.((..(((((((..(((.(((((((......)))))))))).))
)))))..)).))).))).)))))).)))))))).))))))))))))...))))...)))))))).


SIMILARITIES
miRBase ahy-MIR408: 2.0E-6

PMRD ppt-miR408b: 2.0E-6

microPC miR408: 2.0E-6		UniProt no hits

RFAM 8MIR408: 4.0E-5		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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