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ABOUT THIS RECORD
ID:
MNEST003021
species:
Artemisia annua
miRNA family:
MIRf599
source:
miRNEST
Taxonomy by NCBI:
Artemisia annua
Artemisia
Artemisiinae
Anthemideae
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCTGGGATTACAGGCATGAGC
miRNA*
TCATGTCTGCAATCCCAGCAC
mismatches:
1
bulges:
0
View larger
pre-miRNA
CAAGAAATCCTCCCACCTCAGCCTCCCAAGT
GCTGGGATTACAGGCATGAGC
CCCCATGCCCAGCCTCTGAATCATTTTCTTTAGGTTAGCAAACTATTC
GGCCAGATCTTTTAAATACATGAATGCTTTATTGCTTTGTTTTCCTTTAACTCATTCTGTTCTCCACACTCATTTAAGGAGACAAGTCTGTTCATTTCTC
CACCAGATACATTTTACTGTAGGATTTGGGAGTGACAAAGCCGCGAGTCATTTAAACAGCGGGGTTGCATGGCTCAGAAGAGTTGACTACTCACATAAGT
CAGTGTATTGGCGGAGGAGGAAAAATACTCCTTTAAATACGAGTAATAAAACAATATTAAAAGTAGACCAGGCTGGACGCAGTGGC
TCATGTCTGCAATC
CCAGCAC
TTTGGGAGGCTGAGATGGGTAGATCACA
dot-bracket secondary structure
......(((..((((.(((((((((((((((
(((((((((.(((((((((((
(....(((((((((...(((.....)))....((((.((..(((.(((
(((((((((((.....((.((((.(((......((((((((.((((..((.((....(((.((((............))))))).(((((..........
...)))))(((......))).)).)).))))..)))))))).)))..)))).))......))))))...)))))..))).)))(((((.........)))
)).((((((...(((((((........))))))).))))))..(((((......)))))...)).)))).))))))..)))..)))
))))))))).))))
)))))))
.))))))))))))).))))..)))....
SIMILARITIES
miRBase
hsa-mir-619
:
0.00000000002
PMRD
ptc-miRf12412-akr
:
0.000001
microPC
no hits
UniProt
no hits
RFAM
Metazoa_SRP: 8e-18
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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