miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST003025
species: Artemisia annua
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCTTCT

miRNA*
AAGAAGAAGAAGAAGAAGAAG

mismatches: 5
bulges: 0

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pre-miRNA
ACATCATCATCATCATCATCATCATCATCATCATCATCTTCTATAGCGGTTGCACCTCCTAAAAAACTTAAAGTATCAACTAGCAGGGGAAGCAGGATGA
AAACCCTCACCAATACCCGACTTGTCAAACCTCCTAAAAAAAAACTAAAAGCATCAACTTTAAGCACAACACCATCTGAAATTCCAAAGAGTCTGTATGA
TCTGCTTCAGAAAATAGCAAAATTTAGGGAGTCTTTAAAGCAGAACCCCAACAACCGTCATGCAAAAACCAAATTGGAATATCATGAGCCCTTGATTCAC
TGTTCTGTTGCTTACCACCTATCGATTCATGAGTTGCCACGTAACTGGGAATACGACCCCGAAGCCTCCTACGTTCCGAAGCCTCCTGCACCACCCAAAC
CCAAAACGGAGAAGAAGAAGAAGAAGAAGAAGATCAAGATAACCTGTATG


dot-bracket secondary structure
...........(((...(((.((.((.((.((.((.((((((...(((((((.((.................))..))))).)).(((...(((((((((
......)))...((((..(((((.................................................................))))).))))..
...(((((.(((..(((.....(((.(((.((......((((((((.....(((..((((((......(((...))).....))))).)..)))......
.)))))))).......))...(((((((...((((((...))))))..)))).)))))).))).....)))..))).))))).))))))....)))....
((.....)))))))).)).)).)).)).)).)))...)))..........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q8TV08|RS15_METKA: 0.00000007

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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