ABOUT THIS RECORDspecies: Brachypodium distachyon
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCATAGTCATCATCATCATCA miRNA* ATGAAGACGAGGACTATGACA mismatches: 4 bulges: 0 |
pre-miRNA
CGGTGCAAGTTGATGAAGACGAGGACTATGACAACGAGGATTAGGCATAGTCATCATCATCATCATGTGCACTA
dot-bracket secondary structure
.((((((...((((((.((.((.(((((((...............))))))).)).)).))))))..)))))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGGTGCAAGTTGATGAAGACGAGGACTATGACAACGAGGATTAGGCATAGTCATCATCATCATCATGTGCACTA
dot-bracket secondary structure
.((((((...((((((.((.((.(((((((...............))))))).)).)).))))))..)))))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM mir-598: 0.001 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
