miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Brachypodium distachyon



ABOUT THIS RECORD

ID: MNEST003041
species: Brachypodium distachyon
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCATAGTCATCATCATCATCA

miRNA*
ATGAAGACGAGGACTATGACA

mismatches: 4
bulges: 0

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pre-miRNA
CGGTGCAAGTTGATGAAGACGAGGACTATGACAACGAGGATTAGGCATAGTCATCATCATCATCATGTGCACTA

dot-bracket secondary structure
.((((((...((((((.((.((.(((((((...............))))))).)).)).))))))..)))))).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-598: 0.001
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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