miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST003042
species: Brachypodium distachyon
miRNA family: MIR437
source: miRNEST

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGAAGTTTGACTCAGGACAAA

miRNA*
 TGCCCTAAGTCAAACTTTTTA

mismatches: 3
bulges: 0
View larger
pre-miRNA
 CCTTTGTTCTTAAATATAAGATGTTCTAGTTTTGCCCTAAGTCAAACTTTTTAACGTTTGACCAAATTTAGAGAAAAATGTACTGACACCTACAATATCA
AATAAGTATACTATGAAGATATTCATCGTAATTTAGAGTTGTAGATGTTGGGAAAAATTATATAAACTTGGTCAGACTTTAACTTTAGGAAGTTTTTTTT
TTCAGGAATAAACTTTAGGAAGTTTGACTCAGGACAAAGCTTGAACATATTATATTTAGGAAAACTT

dot-bracket secondary structure
......(((((((((((((.((((((.(((((((.(((.(((((((((((((((.((((((((((.((((............((((((.(((((((....
..(((((.(((.(((((....))))).))))))))..))))))).))))))...........)))).)))))))))).))))......(((((((.((((
....)))).)))))))..))))))))))).))).))))))).)))))).))))))))))))).....


SIMILARITIES
miRBase bdi-MIR5169: 0.00000006

PMRD osa-miR437: 0.00005

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;