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ABOUT THIS RECORD
ID:
MNEST003085
species:
Brachypodium distachyon
miRNA family:
MIR393
source:
miRNEST
Taxonomy by NCBI:
Brachypodium distachyon
Brachypodium
Brachypodieae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCAGTGCAATCCCTTTGGAAC
miRNA*
TCCAAAGGGATCGCATTGATC
mismatches:
3
bulges:
0
View larger
pre-miRNA
CTTCAGGAAGCTAGTGGAGGAC
TCCAAAGGGATCGCATTGATC
TCATCAGCTGCATCCAAGCATGAATCAACGGATGGATGGATCGATGCATATGCAAGA
TCAGTGCAATCCCTTTGGAAC
TCTCGACTCGCCTCTGCCT
dot-bracket secondary structure
.....(((.((.(((.((((..
(((((((((((.(((((((((
(...((..((((((....(((..(((....)))..)))....))))))..))..)))
))))))).)))))))))))..
)))).))).)).)))....
SIMILARITIES
miRBase
bdi-MIR393b
:
3e-73
PMRD
zma-miR393
:
0.00000000000003
microPC
miR393
:
0.00003
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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