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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Cynodon dactylon, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST003085
species: Brachypodium distachyon
miRNA family: MIR393
source: miRNEST

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCAGTGCAATCCCTTTGGAAC

miRNA*
 TCCAAAGGGATCGCATTGATC

mismatches: 3
bulges: 0
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pre-miRNA
 CTTCAGGAAGCTAGTGGAGGACTCCAAAGGGATCGCATTGATCTCATCAGCTGCATCCAAGCATGAATCAACGGATGGATGGATCGATGCATATGCAAGA
TCAGTGCAATCCCTTTGGAACTCTCGACTCGCCTCTGCCT

dot-bracket secondary structure
.....(((.((.(((.((((..(((((((((((.((((((((((...((..((((((....(((..(((....)))..)))....))))))..))..)))
))))))).)))))))))))..)))).))).)).)))....


SIMILARITIES
miRBase bdi-MIR393b: 3e-73

PMRD zma-miR393: 0.00000000000003

microPC miR393: 0.00003		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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