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ABOUT THIS RECORD

ID: MNEST003167
species: Helianthus annuus
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCATCATCATCATCATTA

miRNA*
 ATGACGATATGAGTTGGTA

mismatches: 4
bulges: 2
View larger
pre-miRNA
 TTTTTTTTTTTTGGGTCCACAACCAAAGTTTTTTTCTTCTTCATCATCATCATCATCATTAGTGAGACATGGTTTAATCAAAGAAAACGTAAATAGAAAT
TAAAAGATTTGCCAACTCCAAAATGAGCTGCTTCTGGATTAAAAGACCACTGATCACAAAAGCTTCAGCCCACCAGTTACATCATCAACCATATCAGCTG
GCCCAAGAACTGCCATCACTGTCCTTGAATTTGGTGCTATTTGCGTTCTACCAGCATCAATGACGATATGAGTTGGTATAGACAATGATTTTGCTCTTTT
TTGTAATTCCAACAT

dot-bracket secondary structure
..........(((((...((((.(((((((.((.(((...(((...((((.(((.(((((.(((.....((((........(((..((((((((((..((
((((.(((.(...((((......(((...((((.(((((((.........))))).)).)))).))).......))))).))).((((......(((.((
((.........))))...)))...)))).)))))).))))))))))))))))).))).))))).)))))))..)))...))).)).))))))).......
))))...)))))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|Q3ZBL5|PTH2_BOVIN: 0.00000005

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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