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ABOUT THIS RECORD
ID:
MNEST003234
species:
Arabidopsis thaliana
miRNA family:
MIR869
source:
miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCTGGGTTTGAGATAAGTGAC
miRNA*
CAGTTATCTAAGCAGCGTC
mismatches:
4
bulges:
2
View larger
pre-miRNA
GAAGTACCAAGTGTAAAATGA
TCTGGGTTTGAGATAAGTGAC
GAAGAAGAATATAATAATAAATCTTTTAGTACTAGAGAAACAGACTCTGTCTTTGATT
TGTAAACCAAACAAGCAGAAGAGGAATCTGGCTACATTCCATCTATGCCTTGCTTGCGATGTTGTTGGAGAGCCAGTCAAGTCCCTCATAGAGTCCTTCT
CCAGAGGTGGCACATGTGCTCTGAATGTACCACTGTCGTTGACGAAGAGAATGAAGCCAAGCTTGT
CAGTTATCTAAGCAGCGTC
ATGGCGTTGGGAAGA
TCT
dot-bracket secondary structure
......((((.(((...((((
(....((((.((((((.((((
(.((((((.............))))))....((.(((((...((((((((((((..((
(((.......)))))..)))))(((..((((((...(((((.....((.(((....))).))...))))))))))).....)))....))))))).))))
).)).(((((.((((.........)))).))))).(((((.........)))))(((...))))))
)).))))))))))...)))
)).))))))).....
...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q06396|ARF1_ORYSJ: 0.000000000000007
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record