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ABOUT THIS RECORD

ID: MNEST003331
species: Arabidopsis thaliana
miRNA family: miR319b
source: miRNEST

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGAGCTTTCTTCGGTCCACTC

miRNA*
 TTGGACTGAAGGGAGCTCCCT

mismatches: 3
bulges: 0
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pre-miRNA
 TGGTGGAGGAAGAGAGCTTTCTTCGGTCCACTCATGGAGTAATATGTGAGATTTAATTGACTCTCGACTCATTCATCCAAATACCAAATGAAAGAATTTG
TTCTCATATGGTAAATGAATGAATGATGCGAGGGACAAATTGAGTCTTCACTTCTCTATGCTTGGACTGAAGGGAGCTCCCTATTTTTATC

dot-bracket secondary structure
.((((((((.((.(((((((((((((((((..(((((((......(((((((((((((..((((((..((((((((.((..(((((.((((.((......
)).)))).)))))..)).))))))))..))))))...))))))))).))))..)))))))..))))))))))))))))).)).))))))))


SIMILARITIES
miRBase aly-MIR319b: 8e-96

PMRD ath-miR319b: 3e-92

microPC miR319: 1e-91		UniProt no hits

RFAM MIR159: 1e-101		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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