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ABOUT THIS RECORD

ID: MNEST003737
species: Zea mays
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCACG

miRNA*
 TGCTCACTTCTCTTTCTGTCAGT

mismatches: 0
bulges: 2
View larger
pre-miRNA
 GATGGTGTGGCTGACAGAAGAGAGTGAGCACGCATCGGCCAGACTGCATCTATATACGGCTGCCCCAAAGCGACGGATCGATGGATGCCTAGGCGCAGCT
GCTGTTGCGTGCTCACTTCTCTTTCTGTCAGTTCTCTCTC

dot-bracket secondary structure
((.((...((((((((((((((((((((((((((.((((.((.((((.((((.....(((....(((...(((....))).)))..))))))).))))))
)))).))))))))))).)))).)))))))))))..)).))


SIMILARITIES
miRBase zma-MIR156f: 3e-57

PMRD zma-miR156f: 3e-57

microPC miR156: 0.0000001		UniProt no hits

RFAM mir-156: 2e-37		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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