miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Zea mays
ABOUT THIS RECORD
ID:
MNEST003737
species:
Zea mays
miRNA family:
MIR156
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCACG
miRNA*
TGCTCACTTCTCTTTCTGTCAGT
mismatches:
0
bulges:
2
View larger
pre-miRNA
GATGGTGTGGC
TGACAGAAGAGAGTGAGCACG
CATCGGCCAGACTGCATCTATATACGGCTGCCCCAAAGCGACGGATCGATGGATGCCTAGGCGCAGCT
GCTGTTGCG
TGCTCACTTCTCTTTCTGTCAGT
TCTCTCTC
dot-bracket secondary structure
((.((...(((
(((((((((((((((((((((
((.((((.((.((((.((((.....(((....(((...(((....))).)))..))))))).))))))
)))).))))
))))))).)))).))))))))))
)..)).))
SIMILARITIES
miRBase
zma-MIR156f
:
3e-57
PMRD
zma-miR156f
:
3e-57
microPC
miR156
:
0.0000001
UniProt
no hits
RFAM
mir-156: 2e-37
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record