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ABOUT THIS RECORD
ID:
MNEST003773
species:
Zea mays
miRNA family:
MIR169
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGCCAAGCATGATTTGCCCG
miRNA*
GGCAAATCATCTTGGCCATC
mismatches:
1
bulges:
1
View larger
pre-miRNA
GAGAGAGAGGCCTCGCATGGAGGTAGGAGGCCCATCTCTGA
TAGCCAAGCATGATTTGCCCG
TAGTCTGACTCTGAGTGTGCTCCTGCTACG
GGCAAATC
ATCTTGGCCATC
TGAGTACCTCCCTACGCTGTCCCCATGTCAGGAGGCCC
dot-bracket secondary structure
........((((((((((((.(((.(((((.....(((.((
(.((((((.((((((((((((
((((..((............))..))))))
))))))))
)))))))).)))
.)))..)))))....)))....))))))...)))))).
SIMILARITIES
miRBase
bdi-MIR169k
:
0.0000001
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
MIR169_5: 0.0001
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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