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ABOUT THIS RECORD

ID: MNEST004174
species: Oryza sativa
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGGCAATGCTAGAAAGTCTT

miRNA*
 GACTTTCTAACATTGTCCACA

mismatches: 1
bulges: 0
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pre-miRNA
 CTTCCTCCGTTTAACAGTGTAAGACTTTCTAACATTGTCCACATTCATATAGATTTTAATGAATCTAAACATATATGTGTGTCTAGATTCATTAACATCA
ATATGAATGTGGGCAATGCTAGAAAGTCTTACATCGTGAAACGGAGGGA

dot-bracket secondary structure
.(((((((((((.((.(((((((((((((((.((((((((((((((((((.(((.((((((((((((.(((((....))))).)))))))))))).))).
)))))))))))))))))).))))))))))))))).)).)))))))))))


SIMILARITIES
miRBase osa-MIR819k: 5e-44

PMRD osa-miR819k: 5e-44

microPC miR446: 2e-43		UniProt no hits

RFAM MIR1122: 2e-49		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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