miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST004378
species: Oryza sativa
miRNA family: MIR2123
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAAAAAGTCAACGGTGTCAAA

miRNA*
 TGACATCGTTGACTTTTTAGC

mismatches: 0
bulges: 0
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pre-miRNA
 TTTGTCAAGTACTCCCTCCGTTTCAAAATGTTTGACATCGTTGACTTTTTAGCACATGTTTGACCGTTCGTCTTATTCAAACAAATTTGTGAAATATGTA
AAACTATGTGTACATGAAAATATATTTAACAATGAATCAAATGATATGAAAAGAATAAATAATTACTTAAATTTTTTAATAAGACGAATGGTCAAACACG
TACTTAAAAAGTCAACGGTGTCAAACATTTTGAAACGGATGGAGTATTAAATAG

dot-bracket secondary structure
.......((((((((.((((((((((((((((((((((((((((((((((((.((.(((((((((((((((((((((.(((..((((((..((.((((((
..((...)).))))))...((.(((((.....((.(((....))).))....))))).))..))...))))))))).))))))))))))))))))))).)
)..)))))))))))))))))))))))))))))))))))).))))))))......


SIMILARITIES
miRBase osa-MIR806g: 2e-90

PMRD osa-miR806g: 2e-90

microPC miR806: 6e-54		UniProt no hits

RFAM MIR806: 1e-86		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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