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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST004378
species:
Oryza sativa
miRNA family:
MIR2123
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAAAAAGTCAACGGTGTCAAA
miRNA*
TGACATCGTTGACTTTTTAGC
mismatches:
0
bulges:
0
View larger
pre-miRNA
TTTGTCAAGTACTCCCTCCGTTTCAAAATGTT
TGACATCGTTGACTTTTTAGC
ACATGTTTGACCGTTCGTCTTATTCAAACAAATTTGTGAAATATGTA
AAACTATGTGTACATGAAAATATATTTAACAATGAATCAAATGATATGAAAAGAATAAATAATTACTTAAATTTTTTAATAAGACGAATGGTCAAACACG
TACT
TAAAAAGTCAACGGTGTCAAA
CATTTTGAAACGGATGGAGTATTAAATAG
dot-bracket secondary structure
.......((((((((.((((((((((((((((
((((((((((((((((((((.
((.(((((((((((((((((((((.(((..((((((..((.((((((
..((...)).))))))...((.(((((.....((.(((....))).))....))))).))..))...))))))))).))))))))))))))))))))).)
)..)
)))))))))))))))))))))
)))))))))))))).))))))))......
SIMILARITIES
miRBase
osa-MIR806g
:
2e-90
PMRD
osa-miR806g
:
2e-90
microPC
miR806
:
6e-54
UniProt
no hits
RFAM
MIR806: 1e-86
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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