ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-144
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACAGTATAGATGATGTACT miRNA* GATATCATCATATACTGTAAG mismatches: 1 bulges: 1 |
pre-miRNA
GGACCTTGGCTGGGATATCATCATATACTGTAAGTTTGTGATGAGACACTACAGTATAGATGATGTACTAGTCTGGGTA
dot-bracket secondary structure
..((((.((((((.((((((((.(((((((((.((((......))))..))))))))))))))))).)))))).)))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
additional data
download this record
GGACCTTGGCTGGGATATCATCATATACTGTAAGTTTGTGATGAGACACTACAGTATAGATGATGTACTAGTCTGGGTA
dot-bracket secondary structure
..((((.((((((.((((((((.(((((((((.((((......))))..))))))))))))))))).)))))).)))).
SIMILARITIES| miRBase rno-mir-144: 9e-38 PMRD no hits microPC no hits | UniProt no hits RFAM mir-144: 2e-32 | most similar mature miRNAs |
Identical with: mmu-mir-144 from miRBase (MNEST031877) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
additional data
download this record
