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Species belonging to selected taxon:

Mus musculus, Sus scrofa, Bos taurus, Rattus norvegicus, Canis lupus familiaris, Ovis aries, Macaca fascicularis, Papio anubis, Homo sapiens, Peromyscus maniculatus bairdii, Pongo abelii, Ursus americanus, Equus caballus, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Bos indicus, Bos sp., Peromyscus polionotus subgriseus, Capra hircus, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST004940
species: Mus musculus
miRNA family: mir-144
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TACAGTATAGATGATGTACT

miRNA*
 GATATCATCATATACTGTAAG

mismatches: 1
bulges: 1
View larger
pre-miRNA
 GGACCTTGGCTGGGATATCATCATATACTGTAAGTTTGTGATGAGACACTACAGTATAGATGATGTACTAGTCTGGGTA

dot-bracket secondary structure
..((((.((((((.((((((((.(((((((((.((((......))))..))))))))))))))))).)))))).)))).


SIMILARITIES
miRBase rno-mir-144: 9e-38

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-144: 2e-32		most similar mature miRNAs

Identical with: mmu-mir-144 from miRBase (MNEST031877)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
additional data
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