miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
ABOUT THIS RECORD
ID:
MNEST005240
species:
Sus scrofa
miRNA family:
miR-4206
source:
miRNEST
Taxonomy by NCBI:
Sus scrofa
Sus
Suidae
Suina
Cetartiodactyla
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATTGAATGGTTTAGTGAGGCC
miRNA*
TCGAACTTGACTATCTAGAGG
mismatches:
5
bulges:
0
View larger
pre-miRNA
CGCTACTACCG
ATTGAATGGTTTAGTGAGGCC
CTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAGCGCTGAGAAGACGG
TCGAACTTGAC
TATCTAGAGG
AAGTAAAA
dot-bracket secondary structure
...((((.((.
.(((.((((((.(((..((((
.((...(((((.((((((((((((.....))))))))))))...)))))...)).))
))..))).)))
))).))).))
.))))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
SSU_rRNA_eukarya: 5e-59
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record