ABOUT THIS RECORD

ID: MNEST005486
species: Danio rerio
miRNA family: mir-133
source: miRNEST

Taxonomy by NCBI:
Danio rerio Danio Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
TCACGACGCAGTAGCTGGTTGAAGGGGACCAAACCTCGCAGAAACACCTGACTTGGTTCCATTTGACCAGCCACAGCAAGGCG

dot-bracket secondary structure
.......((.((.((((((((((.((((((((......(((......)))..)))))))).)))))))))).)).))......


SIMILARITIES

miRBase dre-mir-133b: 2e-41 PMRD no hits microPC no hits

UniProt no hits RFAM mir-133: 2e-33

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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