ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATCTGTAAACTAATATAAGAG miRNA* CTTATATTAATTTACGGAGGG mismatches: 2 bulges: 0 |
pre-miRNA
TCGTGTGCTGTATTATACTCCATCTGTAAACTAATATAAGAGCATTTAGATCACTACTTTAGTGATCTAAACACTCTTATATTAATTTACGGAGGGAGTA
GTTGCAAAAGTAGT
dot-bracket secondary structure
........((((...((((((.((((((((.(((((((((((..((((((((((((...))))))))))))..))))))))))).)))))))).))))))
..))))........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCGTGTGCTGTATTATACTCCATCTGTAAACTAATATAAGAGCATTTAGATCACTACTTTAGTGATCTAAACACTCTTATATTAATTTACGGAGGGAGTA
GTTGCAAAAGTAGT
dot-bracket secondary structure
........((((...((((((.((((((((.(((((((((((..((((((((((((...))))))))))))..))))))))))).)))))))).))))))
..))))........
SIMILARITIES| miRBase tae-MIR1121: 4e-19 PMRD tmo-miR1120: 4e-22 microPC miR1121: 0.00000000009 | UniProt no hits RFAM MIR1122: 5e-28 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
