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Species belonging to selected taxon:
Agrostis stolonifera
,
Avena barbata
,
Avena sativa
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Pseudoroegneria spicata
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Brachypodium distachyon
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST005859
species:
Triticum aestivum
miRNA family:
MIR1120
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATCTGTAAACTAATATAAGAG
miRNA*
CTTATATTAATTTACGGAGGG
mismatches:
2
bulges:
0
View larger
pre-miRNA
TCGTGTGCTGTATTATACTCC
ATCTGTAAACTAATATAAGAG
CATTTAGATCACTACTTTAGTGATCTAAACACT
CTTATATTAATTTACGGAGGG
AGTA
GTTGCAAAAGTAGT
dot-bracket secondary structure
........((((...((((((
.((((((((.(((((((((((
..((((((((((((...))))))))))))..))
))))))))).)))))))).))
))))
..))))........
SIMILARITIES
miRBase
tae-MIR1121
:
4e-19
PMRD
tmo-miR1120
:
4e-22
microPC
miR1121
:
0.00000000009
UniProt
no hits
RFAM
MIR1122: 5e-28
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record