ABOUT THIS RECORDspecies: Drosophila melanogaster
miRNA family: mir-2
source: miRNEST
Taxonomy by NCBI:
Drosophila melanogaster melanogaster subgroup melanogaster group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATCACAGCCAGCTTTGATGA miRNA* TCAAAGTGGTTGTGAAATG mismatches: 1 bulges: 2 |
pre-miRNA
TTGGCGCATTCATGCTGGGCTCTCAAAGTGGTTGTGAAATGCATTTCCGCTTTGCGCGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCG
T
dot-bracket secondary structure
.(((.(((((.((((((((((((((((((((((((((.((((.....(((...)))..)))).))))))))).)))))).)))))))))))))))).)))
.
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGGCGCATTCATGCTGGGCTCTCAAAGTGGTTGTGAAATGCATTTCCGCTTTGCGCGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCG
T
dot-bracket secondary structure
.(((.(((((.((((((((((((((((((((((((((.((((.....(((...)))..)))).))))))))).)))))).)))))))))))))))).)))
.
SIMILARITIES| miRBase dme-mir-2a-1: 1e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-2: 5e-34 | most similar mature miRNAs |
Identical with: dya-mir-2a-1 from miRBase (MNEST037481) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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