ABOUT THIS RECORD

ID: MNEST007293
species: Pimephales promelas
miRNA family: miR-205
source: miRNEST

Taxonomy by NCBI:
Pimephales promelas Pimephales Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
TAAAGATGTTTTATCTGCTCTGTGAATTCTATCCTTCATTCCACCGGAGTCTGTGTAGCTGTCCAATCAGATTTCAGTGGTGTGAAGTGTAGGAGACATG
GAAAGATCTCATCACCTTC

dot-bracket secondary structure
....((((....((((..((((((..((((((.((((((.((((.((((((((..............)))))))).)))).)))))).))))))..))))
)).))))..))))......


SIMILARITIES

miRBase dre-mir-205: 8e-30 PMRD no hits microPC no hits

UniProt no hits RFAM mir-205: 1e-31

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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